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V J Carey, J Gentry, E Whalen, and R Gentleman (2004)

Network structures and algorithms in Bioconductor.

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Bioinformatics.

SUMMARY: This paper reviews the central concepts and implementations of tools for working with network structures in Bioconductor. Interfaces to open source resources for visualization (AT&T Graphviz) and network algorithms (Boost) have been developed to support analysis of graphical structures in genomics and computational biology. AVAILABILITY: Packages graph, Rgraphviz, RBGL of Bioconductor (www.bioconductor.org). Open source.
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